Геном прокариот/Материалы:NC 001263
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LOCUS NC_001263 2648638 bp DNA circular BCT 06-JUN-2007
DEFINITION Deinococcus radiodurans R1 chromosome 1, complete sequence.
ACCESSION NC_001263
VERSION NC_001263.1 GI:15805042
KEYWORDS .
SOURCE Deinococcus radiodurans R1
ORGANISM Deinococcus radiodurans R1
Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales;
Deinococcaceae; Deinococcus.
REFERENCE 1 (bases 1 to 2648638)
AUTHORS White,O., Eisen,J.A., Heidelberg,J.F., Hickey,E.K., Peterson,J.D.,
Dodson,R.J., Haft,D.H., Gwinn,M.L., Nelson,W.C., Richardson,D.L.,
Moffat,K.S., Qin,H., Jiang,L., Pamphile,W., Crosby,M., Shen,M.,
Vamathevan,J.J., Lam,P., McDonald,L., Utterback,T., Zalewski,C.,
Makarova,K.S., Aravind,L., Daly,M.J., Minton,K.W.,
Fleischmann,R.D., Ketchum,K.A., Nelson,K.E., Salzberg,S.,
Smith,H.O., Venter,J.C. and Fraser,C.M.
TITLE Genome sequence of the radioresistant bacterium Deinococcus
radiodurans R1
JOURNAL Science 286 (5444), 1571-1577 (1999)
PUBMED 10567266
REFERENCE 2 (bases 1 to 2648638)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-SEP-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2648638)
AUTHORS White,O., Eisen,J.A., Heidelberg,J.F., Hickey,E.K., Peterson,J.D.,
Dodson,R.J., Haft,D.H., Gwinn,M.L., Nelson,W.C., Richardson,D.L.,
Moffat,K.S., Qin,H., Jiang,L., Pamphile,W., Crosby,M., Shen,M.,
Vamathevan,J.J., Lam,P., McDonald,L., Utterback,T., Zalewski,C.,
Makarova,K.S., Aravind,L., Daly,M.J., Minton,K.W.,
Fleischmann,R.D., Ketchum,K.A., Nelson,K.E., Salzberg,S.,
Smith,H.O., Venter,J.C. and Fraser,C.M.
TITLE Direct Submission
JOURNAL Submitted (08-NOV-1999) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE000513.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 21938 | 22010 | - | 73 | 15805042 | DR_t01 | - | 17 Phe tRNA |
| 22035 | 22107 | - | 73 | 15805042 | DR_t02 | - | 06 Asp tRNA |
| 41882 | 41954 | + | 73 | 15805042 | DR_t03 | - | 10 Lys tRNA |
| 57084 | 57154 | - | 71 | 15805042 | DR_t04 | - | 05 Gln tRNA |
| 68827 | 68906 | + | 80 | 15805042 | DR_t05 | - | 11 Arg tRNA |
| 84836 | 86337 | + | 1502 | 15805042 | DR_r01 | - | 16S ribosomal RNA |
| 146086 | 146159 | + | 74 | 15805042 | DR_t06 | - | 11 Arg tRNA |
| 249750 | 249822 | - | 73 | 15805042 | DR_t0253 | - | 06 Asp tRNA |
| 254392 | 254515 | + | 124 | 15805042 | DR_r03 | - | 5S ribosomal RNA |
| 254523 | 254595 | + | 73 | 15805042 | DR_t07 | - | 01 Gly tRNA |
| 294646 | 294718 | - | 73 | 15805042 | DR_t08 | - | 02 Ala tRNA |
| 339245 | 339324 | - | 80 | 15805042 | DR_t09 | - | 15 Leu tRNA |
| 498343 | 498414 | - | 72 | 15805042 | DR_t10 | - | 13 Val tRNA |
| 498435 | 498507 | - | 73 | 15805042 | DR_t11 | - | 16 Met tRNA |
| 518331 | 518404 | + | 74 | 15805042 | DR_t12 | - | 11 Arg tRNA |
| 564388 | 564459 | + | 72 | 15805042 | DR_t13 | - | 02 Ala tRNA |
| 564574 | 564645 | - | 72 | 15805042 | DR_t14 | - | 13 Val tRNA |
| 576883 | 576953 | + | 71 | 15805042 | DR_t15 | - | 19 Cys tRNA |
| 576983 | 577054 | + | 72 | 15805042 | DR_t16 | - | 13 Val tRNA |
| 607622 | 607708 | + | 87 | 15805042 | DR_t0595 | - | 08 Ser tRNA |
| 652637 | 652707 | - | 71 | 15805042 | DR_t17 | - | 01 Gly tRNA |
| 652728 | 652801 | - | 74 | 15805042 | DR_t18 | - | 03 Pro tRNA |
| 863725 | 863806 | + | 82 | 15805042 | DR_t0852 | - | 15 Leu tRNA |
| 886348 | 886421 | + | 74 | 15805042 | DR_t19 | - | 14 Ile tRNA |
| 936753 | 936835 | - | 83 | 15805042 | DR_t20 | - | 15 Leu tRNA |
| 936888 | 936961 | - | 74 | 15805042 | DR_t21 | - | 09 His tRNA |
| 1127817 | 1127890 | - | 74 | 15805042 | DR_t22 | - | 03 Pro tRNA |
| 1271535 | 1271616 | - | 82 | 15805042 | DR_t1264 | - | 18 Tyr tRNA |
| 1272041 | 1272112 | - | 72 | 15805042 | DR_t23 | - | 06 Asp tRNA |
| 1317108 | 1317187 | + | 80 | 15805042 | DR_t24 | - | 15 Leu tRNA |
| 1485608 | 1485679 | - | 72 | 15805042 | DR_t25 | - | 12 Thr tRNA |
| 1655398 | 1655471 | - | 74 | 15805042 | DR_t26 | - | 16 Met tRNA |
| 1781166 | 1781244 | - | 79 | 15805042 | DR_t27 | - | 02 Ala tRNA |
| 2005410 | 2005480 | - | 71 | 15805042 | DR_t28 | - | 05 Gln tRNA |
| 2037771 | 2037842 | - | 72 | 15805042 | DR_t29 | - | 10 Lys tRNA |
| 2045580 | 2045666 | + | 87 | 15805042 | DR_t30 | - | 08 Ser tRNA |
| 2063549 | 2063620 | - | 72 | 15805042 | DR_t31 | - | 12 Thr tRNA |
| 2063627 | 2063699 | - | 73 | 15805042 | DR_t32 | - | 01 Gly tRNA |
| 2063707 | 2063789 | - | 83 | 15805042 | DR_t33 | - | 18 Tyr tRNA |
| 2063839 | 2063911 | - | 73 | 15805042 | DR_t34 | - | 12 Thr tRNA |
| 2070898 | 2070969 | + | 72 | 15805042 | DR_t35 | - | 07 Asn tRNA |
| 2118380 | 2118461 | - | 82 | 15805042 | DR_t36 | - | 15 Leu tRNA |
| 2181630 | 2181714 | + | 85 | 15805042 | DR_t37 | - | 08 Ser tRNA |
| 2181747 | 2181836 | + | 90 | 15805042 | DR_t38 | - | 08 Ser tRNA |
| 2181867 | 2181940 | + | 74 | 15805042 | DR_t39 | - | 11 Arg tRNA |
| 2186731 | 2186804 | + | 74 | 15805042 | DR_t40 | - | 03 Pro tRNA |
| 2245003 | 2245082 | - | 80 | 15805042 | DR_t41 | - | 01 Gly tRNA |
| 2245090 | 2245213 | - | 124 | 15805042 | DR_r04 | - | 5S ribosomal RNA |
| 2245319 | 2248200 | - | 2882 | 15805042 | DR_r05 | - | 23S ribosomal RNA |
| 2285518 | 2287019 | - | 1502 | 15805042 | DR_r06 | - | 16S ribosomal RNA |
| 2406652 | 2406724 | - | 73 | 15805042 | DR_t42 | - | 20 Trp tRNA |
| 2467934 | 2469435 | - | 1502 | 15805042 | DR_r07 | - | 16S ribosomal RNA |
| 2530438 | 2530509 | + | 72 | 15805042 | DR_t43 | - | 04 Glu tRNA |
| 2584748 | 2584820 | - | 73 | 15805042 | DR_t44 | - | 01 Gly tRNA |
| 2584828 | 2584951 | - | 124 | 15805042 | DR_r08 | - | 5S ribosomal RNA |
| 2585058 | 2587938 | - | 2881 | 15805042 | DR_r09 | - | 23S ribosomal RNA |

