Геном прокариот/Материалы:NC 002973
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LOCUS NC_002973 2905187 bp DNA circular BCT 31-AUG-2006
DEFINITION Listeria monocytogenes str. 4b F2365, complete genome.
ACCESSION NC_002973
VERSION NC_002973.6 GI:85700163
KEYWORDS .
SOURCE Listeria monocytogenes str. 4b F2365
ORGANISM Listeria monocytogenes str. 4b F2365
Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria.
REFERENCE 1 (bases 1 to 2905187)
AUTHORS Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
Kolonay,J.F., Rasko,D.A., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Beanan,M.J.,
Brinkac,L.M., Daugherty,S.C., Dodson,R.J., Durkin,A.S., Madupu,R.,
Haft,D.H., Selengut,J., Van Aken,S., Khouri,H., Fedorova,N.,
Forberger,H.A., Tran,B., Kathariou,S., Wonderling,L.D.,
Uhlich,G.A., Bayles,D.O., Luchansky,J.B. and Fraser,C.M.
TITLE Whole genome comparisons of serotype 4b and 1/2a strains of the
food-borne pathogen Listeria monocytogenes reveal new insights into
the core genome components of this species
JOURNAL Nucleic Acids Res. 32 (8), 2386-2395 (2004)
PUBMED 15115801
REFERENCE 2 (bases 1 to 2905187)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2905187)
AUTHORS Nelson,K.E., Fouts,D.E., Mongodin,E.F., Ravel,J., DeBoy,R.T.,
Rasko,D.A., Kolonay,J.F., Angiuoli,S., Gill,S.R., Paulsen,I.T.,
Peterson,J.D., White,O., Nelson,W.C., Nierman,W.C., Van Aken,S.E.,
Khouri,H.M., Fedorova,N.B., Forberger,H.A., Tran,B. and Fraser,C.M.
TITLE Direct Submission
JOURNAL Submitted (27-FEB-2004) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017262.
On Jan 24, 2006 this sequence version replaced gi:46906224.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 92983 | 93055 | + | 73 | 85700163 | LMOf2365_tRNA-Lys-1 | - | 10 Lys tRNA |
| 242736 | 244246 | + | 1511 | 85700163 | LMOf2365_16SA | - | 16S ribosomal RNA |
| 244528 | 247459 | + | 2932 | 85700163 | LMOf2365_23SA | - | 23S ribosomal RNA |
| 247537 | 247652 | + | 116 | 85700163 | LMOf2365_5SA | - | 5S ribosomal RNA |
| 247662 | 247734 | + | 73 | 85700163 | LMOf2365_tRNA-Val-1 | - | 13 Val tRNA |
| 247743 | 247818 | + | 76 | 85700163 | LMOf2365_tRNA-Thr-1 | - | 12 Thr tRNA |
| 247859 | 247931 | + | 73 | 85700163 | LMOf2365_tRNA-Lys-2 | - | 10 Lys tRNA |
| 247937 | 248018 | + | 82 | 85700163 | LMOf2365_tRNA-Leu-1 | - | 15 Leu tRNA |
| 248033 | 248104 | + | 72 | 85700163 | LMOf2365_tRNA-Gly-1 | - | 01 Gly tRNA |
| 248126 | 248211 | + | 86 | 85700163 | LMOf2365_tRNA-Leu-2 | - | 15 Leu tRNA |
| 248224 | 248297 | + | 74 | 85700163 | LMOf2365_tRNA-Arg-1 | - | 11 Arg tRNA |
| 248308 | 248381 | + | 74 | 85700163 | LMOf2365_tRNA-Pro-1 | - | 03 Pro tRNA |
| 248400 | 248475 | + | 76 | 85700163 | LMOf2365_tRNA-Ala-1 | - | 02 Ala tRNA |
| 248755 | 250265 | + | 1511 | 85700163 | LMOf2365_16SB | - | 16S ribosomal RNA |
| 250547 | 253478 | + | 2932 | 85700163 | LMOf2365_23SB | - | 23S ribosomal RNA |
| 253556 | 253671 | + | 116 | 85700163 | LMOf2365_5SB | - | 5S ribosomal RNA |
| 684053 | 684142 | - | 90 | 85700163 | LMOf2365_tRNA-Ser-1 | - | 08 Ser tRNA |
| 936580 | 936652 | + | 73 | 85700163 | LMOf2365_tRNA-Asn-1 | - | 07 Asn tRNA |
| 936656 | 936743 | + | 88 | 85700163 | LMOf2365_tRNA-Ser-2 | - | 08 Ser tRNA |
| 940708 | 940779 | + | 72 | 85700163 | LMOf2365_tRNA-Glu-1 | - | 04 Glu tRNA |
| 940806 | 940878 | + | 73 | 85700163 | LMOf2365_tRNA-Asp-1 | - | 06 Asp tRNA |
| 972489 | 972559 | + | 71 | 85700163 | LMOf2365_tRNA-Gly-2 | - | 01 Gly tRNA |
| 1243784 | 1243857 | + | 74 | 85700163 | LMOf2365_tRNA-Arg-2 | - | 11 Arg tRNA |
| 1721829 | 1721900 | - | 72 | 85700163 | LMOf2365_tRNA-Glu-2 | - | 04 Glu tRNA |
| 1721906 | 1721996 | - | 91 | 85700163 | LMOf2365_tRNA-Ser-3 | - | 08 Ser tRNA |
| 1722031 | 1722103 | - | 73 | 85700163 | LMOf2365_tRNA-Asn-2 | - | 07 Asn tRNA |
| 1722110 | 1722183 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-1 | - | 14 Ile tRNA |
| 1722209 | 1722279 | - | 71 | 85700163 | LMOf2365_tRNA-Gly-3 | - | 01 Gly tRNA |
| 1722304 | 1722376 | - | 73 | 85700163 | LMOf2365_tRNA-His-1 | - | 09 His tRNA |
| 1722405 | 1722477 | - | 73 | 85700163 | LMOf2365_tRNA-Phe-1 | - | 17 Phe tRNA |
| 1722482 | 1722557 | - | 76 | 85700163 | LMOf2365_tRNA-Asp-2 | - | 06 Asp tRNA |
| 1722562 | 1722635 | - | 74 | 85700163 | LMOf2365_tRNA-Met-1 | - | 16 Met tRNA |
| 1722678 | 1722767 | - | 90 | 85700163 | LMOf2365_tRNA-Ser-4 | - | 08 Ser tRNA |
| 1722790 | 1722863 | - | 74 | 85700163 | LMOf2365_tRNA-Met-2 | - | 16 Met tRNA |
| 1722875 | 1722948 | - | 74 | 85700163 | LMOf2365_tRNA-Met-3 | - | 16 Met tRNA |
| 1722991 | 1723063 | - | 73 | 85700163 | LMOf2365_tRNA-Ala-2 | - | 02 Ala tRNA |
| 1723086 | 1723159 | - | 74 | 85700163 | LMOf2365_tRNA-Pro-2 | - | 03 Pro tRNA |
| 1723170 | 1723243 | - | 74 | 85700163 | LMOf2365_tRNA-Arg-3 | - | 11 Arg tRNA |
| 1723256 | 1723341 | - | 86 | 85700163 | LMOf2365_tRNA-Leu-3 | - | 15 Leu tRNA |
| 1723363 | 1723434 | - | 72 | 85700163 | LMOf2365_tRNA-Gly-4 | - | 01 Gly tRNA |
| 1723449 | 1723530 | - | 82 | 85700163 | LMOf2365_tRNA-Leu-4 | - | 15 Leu tRNA |
| 1723536 | 1723608 | - | 73 | 85700163 | LMOf2365_tRNA-Lys-3 | - | 10 Lys tRNA |
| 1723649 | 1723724 | - | 76 | 85700163 | LMOf2365_tRNA-Thr-2 | - | 12 Thr tRNA |
| 1723733 | 1723805 | - | 73 | 85700163 | LMOf2365_tRNA-Val-2 | - | 13 Val tRNA |
| 1723815 | 1723930 | - | 116 | 85700163 | LMOf2365_5SC | - | 5S ribosomal RNA |
| 1724008 | 1726939 | - | 2932 | 85700163 | LMOf2365_23SC | - | 23S ribosomal RNA |
| 1727221 | 1728731 | - | 1511 | 85700163 | LMOf2365_16SC | - | 16S ribosomal RNA |
| 1757038 | 1757109 | + | 72 | 85700163 | LMOf2365_tRNA-Arg-4 | - | 11 Arg tRNA |
| 1828492 | 1828607 | - | 116 | 85700163 | LMOf2365_5SD | - | 5S ribosomal RNA |
| 1828685 | 1831616 | - | 2932 | 85700163 | LMOf2365_23SD | - | 23S ribosomal RNA |
| 1831898 | 1833408 | - | 1511 | 85700163 | LMOf2365_16SD | - | 16S ribosomal RNA |
| 1942777 | 1943173 | - | 397 | 85700163 | LMOf2365_rnpB1 | - | sRNA |
| 2150702 | 2150788 | + | 87 | 85700163 | LMOf2365_tRNA-Leu-5 | - | 15 Leu tRNA |
| 2205339 | 2205410 | + | 72 | 85700163 | LMOf2365_tRNA-Glu-3 | - | 04 Glu tRNA |
| 2205568 | 2205641 | + | 74 | 85700163 | LMOf2365_tRNA-Thr-3 | - | 12 Thr tRNA |
| 2205651 | 2205734 | + | 84 | 85700163 | LMOf2365_tRNA-Tyr-1 | - | 18 Tyr tRNA |
| 2205746 | 2205820 | + | 75 | 85700163 | LMOf2365_tRNA-Gln-1 | - | 05 Gln tRNA |
| 2205827 | 2205902 | + | 76 | 85700163 | LMOf2365_tRNA-Lys-4 | - | 10 Lys tRNA |
| 2389821 | 2389904 | - | 84 | 85700163 | LMOf2365_tRNA-Leu-6 | - | 15 Leu tRNA |
| 2389950 | 2390023 | - | 74 | 85700163 | LMOf2365_tRNA-Cys-1 | - | 19 Cys tRNA |
| 2390043 | 2390114 | - | 72 | 85700163 | LMOf2365_tRNA-Gly-5 | - | 01 Gly tRNA |
| 2390120 | 2390191 | - | 72 | 85700163 | LMOf2365_tRNA-Gln-2 | - | 05 Gln tRNA |
| 2390221 | 2390293 | - | 73 | 85700163 | LMOf2365_tRNA-His-2 | - | 09 His tRNA |
| 2390309 | 2390382 | - | 74 | 85700163 | LMOf2365_tRNA-Trp-1 | - | 20 Trp tRNA |
| 2390390 | 2390473 | - | 84 | 85700163 | LMOf2365_tRNA-Tyr-2 | - | 18 Tyr tRNA |
| 2390494 | 2390566 | - | 73 | 85700163 | LMOf2365_tRNA-Phe-2 | - | 17 Phe tRNA |
| 2390571 | 2390646 | - | 76 | 85700163 | LMOf2365_tRNA-Asp-3 | - | 06 Asp tRNA |
| 2390653 | 2390726 | - | 74 | 85700163 | LMOf2365_tRNA-Met-4 | - | 16 Met tRNA |
| 2390748 | 2390823 | - | 76 | 85700163 | LMOf2365_tRNA-Val-3 | - | 13 Val tRNA |
| 2390881 | 2390952 | - | 72 | 85700163 | LMOf2365_tRNA-Glu-4 | - | 04 Glu tRNA |
| 2390986 | 2391074 | - | 89 | 85700163 | LMOf2365_tRNA-Ser-5 | - | 08 Ser tRNA |
| 2391081 | 2391156 | - | 76 | 85700163 | LMOf2365_tRNA-Asn-3 | - | 07 Asn tRNA |
| 2391167 | 2391282 | - | 116 | 85700163 | LMOf2365_5SE | - | 5S ribosomal RNA |
| 2391360 | 2394291 | - | 2932 | 85700163 | LMOf2365_23SE | - | 23S ribosomal RNA |
| 2394464 | 2394539 | - | 76 | 85700163 | LMOf2365_tRNA-Ala-3 | - | 02 Ala tRNA |
| 2394586 | 2394659 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-2 | - | 14 Ile tRNA |
| 2394824 | 2396334 | - | 1511 | 85700163 | LMOf2365_16SE | - | 16S ribosomal RNA |
| 2463498 | 2463864 | - | 367 | 85700163 | LMOf2365_tmRNA1 | - | tmRNA |
| 2494999 | 2495070 | - | 72 | 85700163 | LMOf2365_tRNA-Arg-5 | - | 11 Arg tRNA |
| 2621410 | 2621482 | - | 73 | 85700163 | LMOf2365_tRNA-Thr-4 | - | 12 Thr tRNA |
| 2621507 | 2621582 | - | 76 | 85700163 | LMOf2365_tRNA-Asn-4 | - | 07 Asn tRNA |
| 2621593 | 2621708 | - | 116 | 85700163 | LMOf2365_5SF | - | 5S ribosomal RNA |
| 2621787 | 2624718 | - | 2932 | 85700163 | LMOf2365_23SF | - | 23S ribosomal RNA |
| 2624891 | 2624966 | - | 76 | 85700163 | LMOf2365_tRNA-Ala-4 | - | 02 Ala tRNA |
| 2625013 | 2625086 | - | 74 | 85700163 | LMOf2365_tRNA-Ile-3 | - | 14 Ile tRNA |
| 2625251 | 2626761 | - | 1511 | 85700163 | LMOf2365_16SF | - | 16S ribosomal RNA |
| 2891020 | 2891092 | + | 73 | 85700163 | LMOf2365_tRNA-Val-4 | - | 13 Val tRNA |

