Геном прокариот/Материалы:NC 007503
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LOCUS NC_007503 2401520 bp DNA circular BCT 30-MAR-2006
DEFINITION Carboxydothermus hydrogenoformans Z-2901, complete genome.
ACCESSION NC_007503
VERSION NC_007503.1 GI:78042616
KEYWORDS .
SOURCE Carboxydothermus hydrogenoformans Z-2901
ORGANISM Carboxydothermus hydrogenoformans Z-2901
Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
Carboxydothermus.
REFERENCE 1 (bases 1 to 2401520)
AUTHORS Wu,M., Ren,Q., Durkin,A.S., Daugherty,S.C., Brinkac,L.M.,
Dodson,R.J., Madupu,R., Sullivan,S.A., Kolonay,J.F., Nelson,W.C.,
Tallon,L.J., Jones,K.M., Ulrich,L.E., Gonzalez,J.M., Zhulin,I.B.,
Robb,F.T. and Eisen,J.A.
TITLE Life in Hot Carbon Monoxide: The Complete Genome Sequence of
Carboxydothermus hydrogenoformans Z-2901
JOURNAL (er) PLoS Genet. 1 (5), E65 (2005)
PUBMED 16311624
REFERENCE 2 (bases 1 to 2401520)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2401520)
AUTHORS Eisen,J.A.
TITLE Direct Submission
JOURNAL Submitted (05-OCT-2005) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000141.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 258392 | 258750 | + | 359 | 78042616 | CHY_ChtmRNA1 | - | sRNA |
| 264389 | 264463 | + | 75 | 78042616 | CHY_tRNA-Arg-1 | - | 11 Arg tRNA |
| 278160 | 278233 | + | 74 | 78042616 | CHY_tRNA-Gly-1 | - | 01 Gly tRNA |
| 278245 | 278320 | + | 76 | 78042616 | CHY_tRNA-Arg-2 | - | 11 Arg tRNA |
| 278429 | 278506 | + | 78 | 78042616 | CHY_tRNA-His-1 | - | 09 His tRNA |
| 278524 | 278598 | + | 75 | 78042616 | CHY_tRNA-Gln-1 | - | 05 Gln tRNA |
| 278642 | 278717 | + | 76 | 78042616 | CHY_tRNA-Lys-1 | - | 10 Lys tRNA |
| 278769 | 278851 | + | 83 | 78042616 | CHY_tRNA-Leu-1 | - | 15 Leu tRNA |
| 278866 | 278940 | + | 75 | 78042616 | CHY_tRNA-Gly-2 | - | 01 Gly tRNA |
| 335877 | 335951 | + | 75 | 78042616 | CHY_tRNA-Ala-1 | - | 02 Ala tRNA |
| 400477 | 400551 | + | 75 | 78042616 | CHY_tRNA-Met-1 | - | 16 Met tRNA |
| 400587 | 400662 | + | 76 | 78042616 | CHY_tRNA-Glu-1 | - | 04 Glu tRNA |
| 400664 | 400739 | + | 76 | 78042616 | CHY_tRNA-Val-1 | - | 13 Val tRNA |
| 742181 | 742254 | - | 74 | 78042616 | CHY_tRNA-Pseudo-1 | - | Xaa tRNA |
| 749909 | 749983 | - | 75 | 78042616 | CHY_tRNA-Thr-1 | - | 12 Thr tRNA |
| 793680 | 793754 | - | 75 | 78042616 | CHY_tRNA-Val-2 | - | 13 Val tRNA |
| 916489 | 916564 | - | 76 | 78042616 | CHY_tRNA-Ala-2 | - | 02 Ala tRNA |
| 1070295 | 1070391 | - | 97 | 78042616 | CHY_tRNA-SeC-1 | - | Sec tRNA |
| 1079775 | 1079860 | - | 86 | 78042616 | CHY_tRNA-Leu-2 | - | 15 Leu tRNA |
| 1079872 | 1079946 | - | 75 | 78042616 | CHY_tRNA-Gln-2 | - | 05 Gln tRNA |
| 1080010 | 1080095 | - | 86 | 78042616 | CHY_tRNA-Tyr-1 | - | 18 Tyr tRNA |
| 1080134 | 1080211 | - | 78 | 78042616 | CHY_tRNA-Pro-1 | - | 03 Pro tRNA |
| 1110279 | 1110355 | + | 77 | 78042616 | CHY_tRNA-Pro-2 | - | 03 Pro tRNA |
| 1204907 | 1204982 | - | 76 | 78042616 | CHY_tRNA-Trp-1 | - | 20 Trp tRNA |
| 1392676 | 1392789 | - | 114 | 78042616 | CHY_Ch5SA | - | 5S ribosomal RNA |
| 1392965 | 1395969 | - | 3005 | 78042616 | CHY_Ch23SA | - | 23S ribosomal RNA |
| 1396246 | 1397744 | - | 1499 | 78042616 | CHY_Ch16SA | - | 16S ribosomal RNA |
| 1430299 | 1430373 | - | 75 | 78042616 | CHY_tRNA-Val-3 | - | 13 Val tRNA |
| 1455661 | 1455751 | - | 91 | 78042616 | CHY_tRNA-Leu-3 | - | 15 Leu tRNA |
| 1455786 | 1455860 | - | 75 | 78042616 | CHY_tRNA-Cys-1 | - | 19 Cys tRNA |
| 1455876 | 1455950 | - | 75 | 78042616 | CHY_tRNA-Gly-3 | - | 01 Gly tRNA |
| 1455962 | 1456037 | - | 76 | 78042616 | CHY_tRNA-Phe-1 | - | 17 Phe tRNA |
| 1456046 | 1456122 | - | 77 | 78042616 | CHY_tRNA-Asp-1 | - | 06 Asp tRNA |
| 1473019 | 1473101 | + | 83 | 78042616 | CHY_tRNA-Leu-4 | - | 15 Leu tRNA |
| 1484409 | 1484495 | + | 87 | 78042616 | CHY_tRNA-Leu-5 | - | 15 Leu tRNA |
| 1700676 | 1700752 | - | 77 | 78042616 | CHY_tRNA-Pro-3 | - | 03 Pro tRNA |
| 1893703 | 1893816 | - | 114 | 78042616 | CHY_Ch5SB | - | 5S ribosomal RNA |
| 1893992 | 1896996 | - | 3005 | 78042616 | CHY_Ch23SB | - | 23S ribosomal RNA |
| 1897349 | 1898847 | - | 1499 | 78042616 | CHY_Ch16SB | - | 16S ribosomal RNA |
| 2018316 | 2018429 | - | 114 | 78042616 | CHY_Ch5SC | - | 5S ribosomal RNA |
| 2018476 | 2021481 | - | 3006 | 78042616 | CHY_Ch23SC | - | 23S ribosomal RNA |
| 2021837 | 2023336 | - | 1500 | 78042616 | CHY_Ch16SC | - | 16S ribosomal RNA |
| 2090735 | 2090811 | - | 77 | 78042616 | CHY_tRNA-Met-2 | - | 16 Met tRNA |
| 2090823 | 2090898 | - | 76 | 78042616 | CHY_tRNA-Thr-2 | - | 12 Thr tRNA |
| 2090900 | 2090975 | - | 76 | 78042616 | CHY_tRNA-Met-3 | - | 16 Met tRNA |
| 2091037 | 2091112 | - | 76 | 78042616 | CHY_tRNA-Thr-3 | - | 12 Thr tRNA |
| 2108406 | 2108480 | - | 75 | 78042616 | CHY_tRNA-Asn-1 | - | 07 Asn tRNA |
| 2108647 | 2108721 | - | 75 | 78042616 | CHY_tRNA-Asn-2 | - | 07 Asn tRNA |
| 2108733 | 2108846 | - | 114 | 78042616 | CHY_Ch5SD | - | 5S ribosomal RNA |
| 2108894 | 2111900 | - | 3007 | 78042616 | CHY_Ch23SD | - | 23S ribosomal RNA |
| 2111953 | 2112028 | - | 76 | 78042616 | CHY_tRNA-Ala-3 | - | 02 Ala tRNA |
| 2112060 | 2112136 | - | 77 | 78042616 | CHY_tRNA-Ile-1 | - | 14 Ile tRNA |
| 2112241 | 2113740 | - | 1500 | 78042616 | CHY_Ch16SD | - | 16S ribosomal RNA |
| 2336370 | 2336444 | - | 75 | 78042616 | CHY_tRNA-Gly-4 | - | 01 Gly tRNA |
| 2367950 | 2368024 | - | 75 | 78042616 | CHY_tRNA-Gly-5 | - | 01 Gly tRNA |
| 2368029 | 2368103 | - | 75 | 78042616 | CHY_tRNA-Glu-2 | - | 04 Glu tRNA |
| 2368113 | 2368188 | - | 76 | 78042616 | CHY_tRNA-Lys-2 | - | 10 Lys tRNA |
| 2376650 | 2376743 | - | 94 | 78042616 | CHY_tRNA-Ser-1 | - | 08 Ser tRNA |
| 2376830 | 2376923 | - | 94 | 78042616 | CHY_tRNA-Ser-2 | - | 08 Ser tRNA |
| 2377459 | 2377535 | - | 77 | 78042616 | CHY_tRNA-Arg-3 | - | 11 Arg tRNA |
| 2385890 | 2385966 | - | 77 | 78042616 | CHY_tRNA-Arg-4 | - | 11 Arg tRNA |
| 2385982 | 2386077 | - | 96 | 78042616 | CHY_tRNA-Ser-3 | - | 08 Ser tRNA |
| 2386093 | 2386182 | - | 90 | 78042616 | CHY_tRNA-Ser-4 | - | 08 Ser tRNA |

