Геном прокариот/Материалы:NC 007775
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LOCUS NC_007775 2932766 bp DNA circular BCT 30-MAR-2006
DEFINITION Synechococcus sp. JA-3-3Ab, complete genome.
ACCESSION NC_007775
VERSION NC_007775.1 GI:86604733
KEYWORDS .
SOURCE Synechococcus sp. JA-3-3Ab
ORGANISM Synechococcus sp. JA-3-3Ab
Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
REFERENCE 1 (bases 1 to 2932766)
AUTHORS Allewalt,J.P., Bateson,M.M., Revsbech,N.P., Slack,K. and Ward,D.M.
TITLE Effect of temperature and light on growth of and photosynthesis by
Synechococcus isolates typical of those predominating in the
octopus spring microbial mat community of Yellowstone National Park
JOURNAL Appl. Environ. Microbiol. 72 (1), 544-550 (2006)
PUBMED 16391090
REFERENCE 2 (bases 1 to 2932766)
AUTHORS Bateson,M.M. and Ward,D.M.
TITLE Direct Submission
JOURNAL Submitted (10-MAR-2006) Department of Land Resources and
Environmental Sciences, Montana State University - Bozeman, 334
Leon Johnson Hall P.O. Box 173120, Bozeman, MT 59717-3120, USA
REMARK Sequence update by submitter
REFERENCE 3 (bases 1 to 2932766)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 2932766)
AUTHORS Heidelberg,J.
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2005) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000239.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 32386 | 32458 | - | 73 | 86604733 | CYA_0033 | - | 16 Met tRNA |
| 167006 | 167083 | - | 78 | 86604733 | CYA_0168 | - | 11 Arg tRNA |
| 253975 | 254046 | + | 72 | 86604733 | CYA_0250 | - | 07 Asn tRNA |
| 369842 | 369913 | - | 72 | 86604733 | CYA_0351 | - | 01 Gly tRNA |
| 470364 | 470435 | + | 72 | 86604733 | CYA_0451 | - | 16 Met tRNA |
| 664036 | 664109 | + | 74 | 86604733 | CYA_0655 | - | 11 Arg tRNA |
| 679734 | 679805 | + | 72 | 86604733 | CYA_0670 | - | 01 Gly tRNA |
| 760753 | 760832 | + | 80 | 86604733 | CYA_0755 | - | 15 Leu tRNA |
| 837478 | 837551 | + | 74 | 86604733 | CYA_0823 | - | 11 Arg tRNA |
| 994002 | 994075 | - | 74 | 86604733 | CYA_0980 | - | 16 Met tRNA |
| 1035752 | 1036152 | - | 401 | 86604733 | CYA_1017 | - | sRNA |
| 1036257 | 1036328 | + | 72 | 86604733 | CYA_1018 | - | 10 Lys tRNA |
| 1106587 | 1106706 | - | 120 | 86604733 | CYA_1085 | - | 5S ribosomal RNA |
| 1106765 | 1109571 | - | 2807 | 86604733 | CYA_1086 | - | 23S ribosomal RNA |
| 1109696 | 1109771 | - | 76 | 86604733 | CYA_1087 | - | 02 Ala tRNA |
| 1109808 | 1109881 | - | 74 | 86604733 | CYA_1088 | - | 14 Ile tRNA |
| 1110127 | 1111450 | - | 1324 | 86604733 | CYA_1089 | - | 16S ribosomal RNA |
| 1205694 | 1205766 | - | 73 | 86604733 | CYA_1191 | - | 04 Glu tRNA |
| 1210512 | 1210602 | - | 91 | 86604733 | CYA_1198 | - | 08 Ser tRNA |
| 1217328 | 1217408 | + | 81 | 86604733 | CYA_1207 | - | 15 Leu tRNA |
| 1345120 | 1345192 | - | 73 | 86604733 | CYA_1330 | - | 17 Phe tRNA |
| 1355452 | 1355523 | - | 72 | 86604733 | CYA_1344 | - | 10 Lys tRNA |
| 1355624 | 1356022 | + | 399 | 86604733 | CYA_1345 | - | sRNA |
| 1361661 | 1361736 | - | 76 | 86604733 | CYA_1348 | - | 11 Arg tRNA |
| 1363175 | 1363248 | + | 74 | 86604733 | CYA_1352 | - | 03 Pro tRNA |
| 1415958 | 1416029 | + | 72 | 86604733 | CYA_1410 | - | 13 Val tRNA |
| 1430438 | 1430510 | - | 73 | 86604733 | CYA_1422 | - | 02 Ala tRNA |
| 1470167 | 1470239 | + | 73 | 86604733 | CYA_1464 | - | 02 Ala tRNA |
| 1607074 | 1607145 | + | 72 | 86604733 | CYA_1596 | - | 19 Cys tRNA |
| 1622360 | 1622435 | - | 76 | 86604733 | CYA_1618 | - | 20 Trp tRNA |
| 1638093 | 1638166 | - | 74 | 86604733 | CYA_1637 | - | 03 Pro tRNA |
| 1790745 | 1790817 | + | 73 | 86604733 | CYA_1790 | - | 09 His tRNA |
| 1822297 | 1822383 | - | 87 | 86604733 | CYA_1815 | - | 15 Leu tRNA |
| 1857612 | 1857695 | - | 84 | 86604733 | CYA_1853 | - | 15 Leu tRNA |
| 1890240 | 1890313 | + | 74 | 86604733 | CYA_1884 | - | 06 Asp tRNA |
| 1964028 | 1964115 | + | 88 | 86604733 | CYA_1952 | - | 08 Ser tRNA |
| 1989763 | 1989836 | + | 74 | 86604733 | CYA_1972 | - | 03 Pro tRNA |
| 2255503 | 2255590 | - | 88 | 86604733 | CYA_2244 | - | 08 Ser tRNA |
| 2277877 | 2277957 | - | 81 | 86604733 | CYA_2268 | - | 15 Leu tRNA |
| 2291451 | 2291522 | - | 72 | 86604733 | CYA_2287 | - | 13 Val tRNA |
| 2305106 | 2305177 | + | 72 | 86604733 | CYA_2303 | - | 13 Val tRNA |
| 2310397 | 2311720 | + | 1324 | 86604733 | CYA_2307 | - | 16S ribosomal RNA |
| 2311966 | 2312039 | + | 74 | 86604733 | CYA_2308 | - | 14 Ile tRNA |
| 2312076 | 2312151 | + | 76 | 86604733 | CYA_2309 | - | 02 Ala tRNA |
| 2312276 | 2315082 | + | 2807 | 86604733 | CYA_2310 | - | 23S ribosomal RNA |
| 2315141 | 2315260 | + | 120 | 86604733 | CYA_2311 | - | 5S ribosomal RNA |
| 2409055 | 2409127 | - | 73 | 86604733 | CYA_2397 | - | 12 Thr tRNA |
| 2500377 | 2500463 | + | 87 | 86604733 | CYA_2490 | - | Xaa tRNA |
| 2693023 | 2693094 | + | 72 | 86604733 | CYA_2677 | - | 05 Gln tRNA |
| 2766302 | 2766374 | + | 73 | 86604733 | CYA_2745 | - | 12 Thr tRNA |
| 2792396 | 2792466 | - | 71 | 86604733 | CYA_2770 | - | 01 Gly tRNA |
| 2858802 | 2858884 | - | 83 | 86604733 | CYA_2840 | - | 15 Leu tRNA |
| 2863555 | 2863639 | - | 85 | 86604733 | CYA_2847 | - | 08 Ser tRNA |
| 2921457 | 2921542 | + | 86 | 86604733 | CYA_2896 | - | 18 Tyr tRNA |
| 2921547 | 2921618 | + | 72 | 86604733 | CYA_2898 | - | 12 Thr tRNA |

