Геном прокариот/Материалы:NC 007880
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LOCUS NC_007880 1895994 bp DNA circular BCT 28-JUN-2007
DEFINITION Francisella tularensis subsp. holarctica, complete genome.
ACCESSION NC_007880
VERSION NC_007880.1 GI:89255449
KEYWORDS complete genome.
SOURCE Francisella tularensis subsp. holarctica
ORGANISM Francisella tularensis subsp. holarctica
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Francisellaceae; Francisella.
REFERENCE 1
AUTHORS Chain,P., Larimer,F., Land,M., Stilwagen,S., Larsson,P.,
Bearden,S., Chu,M., Oyston,P., Forsman,M., Andersson,S.,
Lindler,L., Titball,R. and Garcia,E.
TITLE Complete genome sequence of Francisella tularensis LVS (Live
Vaccine Strain)
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1895994)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1895994)
AUTHORS Larimer,F.W.
CONSRTM Microbial Genomics Group, Lawrence Livermore National Laboratory,
and the Genome Analysis Group, Oak Ridge National Laboratory
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2006) Larimer F.W., Genome Analysis Group, Oak
Ridge National Laboratory, Oak Ridge, TN 37831, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM233362.
Submitted on behalf of the Microbial Genomics Group, Lawrence
Livermore National Laboratory, and the Genome Analysis Group, Oak
Ridge National Laboratory;
chain2@llnl.gov, larimerfw@ornl.gov.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 22726 | 23146 | - | 421 | 89255449 | FTL_R0001 | - | tmRNA |
| 75725 | 75874 | - | 150 | 89255449 | FTL_R0002 | - | |
| 124675 | 126197 | + | 1523 | 89255449 | FTL_R0003 | - | 16S ribosomal RNA |
| 126294 | 126370 | + | 77 | 89255449 | FTL_R0004 | - | 14 Ile tRNA |
| 126385 | 126460 | + | 76 | 89255449 | FTL_R0005 | - | 02 Ala tRNA |
| 126515 | 129399 | + | 2885 | 89255449 | FTL_R0006 | - | 23S ribosomal RNA |
| 129446 | 129559 | + | 114 | 89255449 | FTL_R0007 | - | 5S ribosomal RNA |
| 158522 | 158596 | + | 75 | 89255449 | FTL_R0008 | - | 05 Gln tRNA |
| 223322 | 223397 | + | 76 | 89255449 | FTL_R0009 | - | 04 Glu tRNA |
| 269693 | 269982 | + | 290 | 89255449 | FTL_R0010 | - | RNA component of RNaseP |
| 293198 | 293272 | - | 75 | 89255449 | FTL_R0011 | - | 01 Gly tRNA |
| 293287 | 293363 | - | 77 | 89255449 | FTL_R0012 | - | 11 Arg tRNA |
| 327770 | 327859 | + | 90 | 89255449 | FTL_R0013 | - | 08 Ser tRNA |
| 414280 | 414371 | + | 92 | 89255449 | FTL_R0014 | - | 08 Ser tRNA |
| 414399 | 414474 | + | 76 | 89255449 | FTL_R0015 | - | 13 Val tRNA |
| 415696 | 417218 | + | 1523 | 89255449 | FTL_R0016 | - | 16S ribosomal RNA |
| 417315 | 417391 | + | 77 | 89255449 | FTL_R0017 | - | 14 Ile tRNA |
| 417406 | 417481 | + | 76 | 89255449 | FTL_R0018 | - | 02 Ala tRNA |
| 417536 | 420420 | + | 2885 | 89255449 | FTL_R0019 | - | 23S ribosomal RNA |
| 420467 | 420580 | + | 114 | 89255449 | FTL_R0020 | - | 5S ribosomal RNA |
| 450179 | 450301 | + | 123 | 89255449 | FTL_R0053 | - | 5S ribosomal RNA |
| 526940 | 527016 | - | 77 | 89255449 | FTL_R0021 | - | 16 Met tRNA |
| 607036 | 607122 | + | 87 | 89255449 | FTL_R0022 | - | 15 Leu tRNA |
| 636544 | 636619 | - | 76 | 89255449 | FTL_R0023 | - | 07 Asn tRNA |
| 643871 | 643945 | + | 75 | 89255449 | FTL_R0024 | - | 01 Gly tRNA |
| 643961 | 644034 | + | 74 | 89255449 | FTL_R0025 | - | 19 Cys tRNA |
| 644040 | 644128 | + | 89 | 89255449 | FTL_R0026 | - | 15 Leu tRNA |
| 996254 | 996355 | + | 102 | 89255449 | FTL_R0027 | - | |
| 1119314 | 1120836 | + | 1523 | 89255449 | FTL_R0028 | - | 16S ribosomal RNA |
| 1120933 | 1121009 | + | 77 | 89255449 | FTL_R0029 | - | 14 Ile tRNA |
| 1121024 | 1121099 | + | 76 | 89255449 | FTL_R0030 | - | 02 Ala tRNA |
| 1121154 | 1124038 | + | 2885 | 89255449 | FTL_R0031 | - | 23S ribosomal RNA |
| 1124085 | 1124198 | + | 114 | 89255449 | FTL_R0032 | - | 5S ribosomal RNA |
| 1229575 | 1229651 | + | 77 | 89255449 | FTL_R0033 | - | 13 Val tRNA |
| 1293099 | 1293186 | + | 88 | 89255449 | FTL_R0034 | - | 08 Ser tRNA |
| 1347516 | 1347598 | - | 83 | 89255449 | FTL_R0035 | - | 15 Leu tRNA |
| 1347605 | 1347680 | - | 76 | 89255449 | FTL_R0036 | - | 09 His tRNA |
| 1347708 | 1347784 | - | 77 | 89255449 | FTL_R0037 | - | 11 Arg tRNA |
| 1347793 | 1347869 | - | 77 | 89255449 | FTL_R0038 | - | 03 Pro tRNA |
| 1347887 | 1347962 | - | 76 | 89255449 | FTL_R0039 | - | 17 Phe tRNA |
| 1414355 | 1414430 | - | 76 | 89255449 | FTL_R0040 | - | 10 Lys tRNA |
| 1463182 | 1463257 | - | 76 | 89255449 | FTL_R0041 | - | 13 Val tRNA |
| 1642900 | 1642976 | + | 77 | 89255449 | FTL_R0042 | - | 16 Met tRNA |
| 1648050 | 1648125 | + | 76 | 89255449 | FTL_R0043 | - | 11 Arg tRNA |
| 1648462 | 1648569 | - | 108 | 89255449 | FTL_R0044 | - | SRP RNA; RNA component of signal recognition particle |
| 1685006 | 1685081 | - | 76 | 89255449 | FTL_R0045 | - | 20 Trp tRNA |
| 1686330 | 1686405 | - | 76 | 89255449 | FTL_R0046 | - | 12 Thr tRNA |
| 1686434 | 1686507 | - | 74 | 89255449 | FTL_R0047 | - | 01 Gly tRNA |
| 1686509 | 1686593 | - | 85 | 89255449 | FTL_R0048 | - | 18 Tyr tRNA |
| 1710228 | 1710313 | - | 86 | 89255449 | FTL_R0049 | - | 15 Leu tRNA |
| 1746187 | 1746263 | - | 77 | 89255449 | FTL_R0050 | - | 16 Met tRNA |
| 1894069 | 1894145 | - | 77 | 89255449 | FTL_R0051 | - | 06 Asp tRNA |
| 1894150 | 1894225 | - | 76 | 89255449 | FTL_R0052 | - | 12 Thr tRNA |

