Геном прокариот/Материалы:NC 009614
|
|
Базовый уровень статей Выделить только проверенную информацию |
|
|
Создать черновик |
LOCUS NC_009614 5163189 bp DNA circular BCT 29-JUN-2007
DEFINITION Bacteroides vulgatus ATCC 8482, complete genome.
ACCESSION NC_009614
VERSION NC_009614.1 GI:150002608
KEYWORDS .
SOURCE Bacteroides vulgatus ATCC 8482
ORGANISM Bacteroides vulgatus ATCC 8482
Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
Bacteroidaceae; Bacteroides.
REFERENCE 1 (bases 1 to 5163189)
AUTHORS Xu,J., Mahowald,M.A., Ley,R.E., Lozupone,C.A., Hamady,M.,
Martens,E.C., Henrissat,B., Coutinho,P.M., Minx,P., Latreille,P.,
Cordum,H., Van Brunt,A., Kim,K., Fulton,R.S., Fulton,L.A.,
Clifton,S.W., Wilson,R.K., Knight,R.D. and Gordon,J.I.
TITLE Evolution of Symbiotic Bacteria in the Distal Human Intestine
JOURNAL (er) PLoS Biol. 5 (7), E156 (2007) In press
PUBMED 17579514
REFERENCE 2 (bases 1 to 5163189)
AUTHORS Xu,J., Minx,P., Latreille,P., Cordum,H., Van Brunt,A., Kim,K.,
Fulton,R., Fulton,L., Chinwalla,A., Clifton,S., Wilson,R.,
Mahowald,M., Henrissat,B., Martens,E., Ley,R. and Gordon,J.
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) Genome Sequencing Center and Center for
Genome Science, Washington University in St. Louis, 4444 Forest
Park Boulevard, St. Louis, MO 63108, USA
REFERENCE 3 (bases 1 to 5163189)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (14-SEP-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000139.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 212263 | 212336 | - | 74 | 150002608 | BVU_0139 | - | 16 Met tRNA |
| 212396 | 212472 | - | 77 | 150002608 | BVU_0140 | - | 16 Met tRNA |
| 325238 | 325322 | + | 85 | 150002608 | BVU_0211 | - | 15 Leu tRNA |
| 343154 | 343304 | - | 151 | 150002608 | BVU_0224 | - | 5S ribosomal RNA |
| 343479 | 346279 | - | 2801 | 150002608 | BVU_0225 | - | 23S ribosomal RNA |
| 346422 | 346495 | - | 74 | 150002608 | BVU_0226 | - | 02 Ala tRNA |
| 346510 | 346586 | - | 77 | 150002608 | BVU_0227 | - | 14 Ile tRNA |
| 346743 | 348252 | - | 1510 | 150002608 | BVU_0228 | - | 16S ribosomal RNA |
| 501218 | 501291 | + | 74 | 150002608 | BVU_0344 | - | 12 Thr tRNA |
| 559150 | 559225 | + | 76 | 150002608 | BVU_0386 | - | 16 Met tRNA |
| 586711 | 586788 | - | 78 | 150002608 | BVU_0405 | - | 13 Val tRNA |
| 586826 | 586903 | - | 78 | 150002608 | BVU_0406 | - | 13 Val tRNA |
| 586942 | 587016 | - | 75 | 150002608 | BVU_0407 | - | 13 Val tRNA |
| 644263 | 644416 | - | 154 | 150002608 | BVU_0454 | - | 5S ribosomal RNA |
| 644595 | 647392 | - | 2798 | 150002608 | BVU_0455 | - | 23S ribosomal RNA |
| 647521 | 647594 | - | 74 | 150002608 | BVU_0456 | - | 02 Ala tRNA |
| 647609 | 647685 | - | 77 | 150002608 | BVU_0457 | - | 14 Ile tRNA |
| 647842 | 649351 | - | 1510 | 150002608 | BVU_0458 | - | 16S ribosomal RNA |
| 920325 | 920397 | - | 73 | 150002608 | BVU_0641 | - | 03 Pro tRNA |
| 920578 | 920653 | + | 76 | 150002608 | BVU_0642 | - | 17 Phe tRNA |
| 1118688 | 1118763 | - | 76 | 150002608 | BVU_0819 | - | 20 Trp tRNA |
| 1120057 | 1120128 | - | 72 | 150002608 | BVU_0821 | - | 12 Thr tRNA |
| 1120141 | 1120213 | - | 73 | 150002608 | BVU_0822 | - | 01 Gly tRNA |
| 1120247 | 1120329 | - | 83 | 150002608 | BVU_0823 | - | 18 Tyr tRNA |
| 1120370 | 1120446 | - | 77 | 150002608 | BVU_0824 | - | 12 Thr tRNA |
| 1133552 | 1133625 | + | 74 | 150002608 | BVU_0837 | - | 07 Asn tRNA |
| 1133651 | 1133724 | + | 74 | 150002608 | BVU_0838 | - | 07 Asn tRNA |
| 1160440 | 1160527 | - | 88 | 150002608 | BVU_0855 | - | 15 Leu tRNA |
| 1160544 | 1160616 | - | 73 | 150002608 | BVU_0856 | - | 01 Gly tRNA |
| 1295598 | 1295672 | + | 75 | 150002608 | BVU_0980 | - | 11 Arg tRNA |
| 1304273 | 1304347 | + | 75 | 150002608 | BVU_0987 | - | 11 Arg tRNA |
| 1609248 | 1609318 | + | 71 | 150002608 | BVU_1193 | - | 05 Gln tRNA |
| 1753704 | 1753780 | + | 77 | 150002608 | BVU_1303 | - | 16 Met tRNA |
| 1862642 | 1862716 | - | 75 | 150002608 | BVU_1390 | - | 04 Glu tRNA |
| 1916377 | 1916463 | + | 87 | 150002608 | BVU_1436 | - | 15 Leu tRNA |
| 2084769 | 2084844 | - | 76 | 150002608 | BVU_1600 | - | 17 Phe tRNA |
| 2095441 | 2096950 | + | 1510 | 150002608 | BVU_1609 | - | 16S ribosomal RNA |
| 2097107 | 2097183 | + | 77 | 150002608 | BVU_1610 | - | 14 Ile tRNA |
| 2097198 | 2097271 | + | 74 | 150002608 | BVU_1611 | - | 02 Ala tRNA |
| 2097403 | 2100203 | + | 2801 | 150002608 | BVU_1612 | - | 23S ribosomal RNA |
| 2100376 | 2100526 | + | 151 | 150002608 | BVU_1613 | - | 5S ribosomal RNA |
| 2183533 | 2185042 | + | 1510 | 150002608 | BVU_1695 | - | 16S ribosomal RNA |
| 2185199 | 2185275 | + | 77 | 150002608 | BVU_1696 | - | 14 Ile tRNA |
| 2185290 | 2185363 | + | 74 | 150002608 | BVU_1697 | - | 02 Ala tRNA |
| 2185488 | 2188316 | + | 2829 | 150002608 | BVU_1698 | - | 23S ribosomal RNA |
| 2188468 | 2188621 | + | 154 | 150002608 | BVU_1699 | - | 5S ribosomal RNA |
| 2380095 | 2380170 | - | 76 | 150002608 | BVU_1834 | - | 10 Lys tRNA |
| 2471158 | 2471235 | - | 78 | 150002608 | BVU_1898 | - | 03 Pro tRNA |
| 2499345 | 2499415 | + | 71 | 150002608 | BVU_1922 | - | 05 Gln tRNA |
| 2522607 | 2522694 | + | 88 | 150002608 | BVU_1941 | - | 08 Ser tRNA |
| 2587720 | 2589229 | + | 1510 | 150002608 | BVU_1999 | - | 16S ribosomal RNA |
| 2589387 | 2589463 | + | 77 | 150002608 | BVU_2000 | - | 14 Ile tRNA |
| 2589478 | 2589551 | + | 74 | 150002608 | BVU_2001 | - | 02 Ala tRNA |
| 2589683 | 2592483 | + | 2801 | 150002608 | BVU_2002 | - | 23S ribosomal RNA |
| 2592656 | 2592806 | + | 151 | 150002608 | BVU_2003 | - | 5S ribosomal RNA |
| 2696565 | 2696640 | - | 76 | 150002608 | BVU_2084 | - | 20 Trp tRNA |
| 2710261 | 2710348 | + | 88 | 150002608 | BVU_2094 | - | 08 Ser tRNA |
| 2864348 | 2864424 | + | 77 | 150002608 | BVU_2217 | - | 09 His tRNA |
| 2907991 | 2908081 | + | 91 | 150002608 | BVU_2248 | - | 08 Ser tRNA |
| 3129407 | 3129481 | - | 75 | 150002608 | BVU_2434 | - | 04 Glu tRNA |
| 3152477 | 3152564 | + | 88 | 150002608 | BVU_2451 | - | 08 Ser tRNA |
| 3328901 | 3328976 | - | 76 | 150002608 | BVU_2616 | - | 01 Gly tRNA |
| 3328983 | 3329068 | - | 86 | 150002608 | BVU_2617 | - | 18 Tyr tRNA |
| 3345414 | 3345487 | + | 74 | 150002608 | BVU_2637 | - | 12 Thr tRNA |
| 3442271 | 3442343 | + | 73 | 150002608 | BVU_2700 | - | 10 Lys tRNA |
| 3460103 | 3460176 | + | 74 | 150002608 | BVU_2716 | - | 11 Arg tRNA |
| 3633137 | 3633243 | - | 107 | 150002608 | BVU_2862 | - | 03 Pro tRNA |
| 3633700 | 3633774 | - | 75 | 150002608 | BVU_2863 | - | 01 Gly tRNA |
| 3633851 | 3633924 | - | 74 | 150002608 | BVU_2864 | - | Xaa tRNA |
| 3635249 | 3635321 | - | 73 | 150002608 | BVU_2868 | - | Xaa tRNA |
| 3648475 | 3648550 | - | 76 | 150002608 | BVU_2883 | - | 04 Glu tRNA |
| 3648903 | 3648992 | - | 90 | 150002608 | BVU_2884 | - | 08 Ser tRNA |
| 3649671 | 3649745 | - | 75 | 150002608 | BVU_2886 | - | 19 Cys tRNA |
| 3770740 | 3770813 | + | 74 | 150002608 | BVU_2975 | - | 06 Asp tRNA |
| 3838191 | 3838264 | + | 74 | 150002608 | BVU_3031 | - | 02 Ala tRNA |
| 3881472 | 3881547 | - | 76 | 150002608 | BVU_3068 | - | 10 Lys tRNA |
| 3881565 | 3881640 | - | 76 | 150002608 | BVU_3069 | - | 10 Lys tRNA |
| 3881662 | 3881737 | - | 76 | 150002608 | BVU_3070 | - | 10 Lys tRNA |
| 3943164 | 3943236 | + | 73 | 150002608 | BVU_3118 | - | 01 Gly tRNA |
| 3958542 | 3958639 | + | 98 | 150002608 | BVU_3138 | - | 01 Gly tRNA |
| 4005155 | 4005229 | + | 75 | 150002608 | BVU_3178 | - | 03 Pro tRNA |
| 4018554 | 4018627 | + | 74 | 150002608 | BVU_3192 | - | 03 Pro tRNA |
| 4140343 | 4140419 | + | 77 | 150002608 | BVU_3302 | - | 11 Arg tRNA |
| 4140446 | 4140522 | + | 77 | 150002608 | BVU_3303 | - | 11 Arg tRNA |
| 4140540 | 4140616 | + | 77 | 150002608 | BVU_3304 | - | 11 Arg tRNA |
| 4389394 | 4389469 | - | 76 | 150002608 | BVU_3531 | - | 01 Gly tRNA |
| 4389482 | 4389565 | - | 84 | 150002608 | BVU_3532 | - | 15 Leu tRNA |
| 4389613 | 4389685 | - | 73 | 150002608 | BVU_3533 | - | 01 Gly tRNA |
| 4389699 | 4389785 | - | 87 | 150002608 | BVU_3534 | - | 15 Leu tRNA |
| 4389806 | 4389889 | - | 84 | 150002608 | BVU_3535 | - | 15 Leu tRNA |
| 4389937 | 4390009 | - | 73 | 150002608 | BVU_3536 | - | 01 Gly tRNA |
| 4426898 | 4427051 | - | 154 | 150002608 | BVU_3568 | - | 5S ribosomal RNA |
| 4427224 | 4430024 | - | 2801 | 150002608 | BVU_3569 | - | 23S ribosomal RNA |
| 4430156 | 4430229 | - | 74 | 150002608 | BVU_3570 | - | 02 Ala tRNA |
| 4430244 | 4430320 | - | 77 | 150002608 | BVU_3571 | - | 14 Ile tRNA |
| 4430477 | 4431986 | - | 1510 | 150002608 | BVU_3572 | - | 16S ribosomal RNA |
| 4739563 | 4739713 | - | 151 | 150002608 | BVU_3837 | - | 5S ribosomal RNA |
| 4739983 | 4742686 | - | 2704 | 150002608 | BVU_3838 | - | 23S ribosomal RNA |
| 4742818 | 4742891 | - | 74 | 150002608 | BVU_3839 | - | 02 Ala tRNA |
| 4742906 | 4742982 | - | 77 | 150002608 | BVU_3840 | - | 14 Ile tRNA |
| 4743140 | 4744649 | - | 1510 | 150002608 | BVU_3841 | - | 16S ribosomal RNA |
| 4750932 | 4751005 | - | 74 | 150002608 | BVU_3847 | - | 06 Asp tRNA |
| 4751032 | 4751108 | - | 77 | 150002608 | BVU_3848 | - | 06 Asp tRNA |
| 4751136 | 4751212 | - | 77 | 150002608 | BVU_3849 | - | 06 Asp tRNA |
| 4945067 | 4945142 | - | 76 | 150002608 | BVU_4012 | - | 12 Thr tRNA |
| 5109224 | 5109298 | - | 75 | 150002608 | BVU_4146 | - | 11 Arg tRNA |

