Геном прокариот/Материалы:NC 009675
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LOCUS NC_009675 5277990 bp DNA circular BCT 25-JUL-2007
DEFINITION Anaeromyxobacter sp. Fw109-5, complete genome.
ACCESSION NC_009675
VERSION NC_009675.1 GI:153002879
KEYWORDS .
SOURCE Anaeromyxobacter sp. Fw109-5
ORGANISM Anaeromyxobacter sp. Fw109-5
Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
Cystobacterineae; Myxococcaceae; Anaeromyxobacter.
REFERENCE 1 (bases 1 to 5277990)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D.,
Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L.,
Kyrpides,N., Lykidis,A., Fields,M. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Anaeromyxobacter sp. Fw109-5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5277990)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5277990)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D.,
Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L.,
Kyrpides,N., Lykidis,A., Fields,M. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (12-JUL-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000769.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4002939
Source DNA and bacteria available from Matthew Fields
(matthew.fields@erc.montana.edu)
Contacts: Matthew Fields (matthew.fields@erc.montana.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 7872 | 7945 | + | 74 | 153002879 | Anae109_R0001 | - | 05 Gln tRNA |
| 21809 | 21881 | + | 73 | 153002879 | Anae109_R0002 | - | 17 Phe tRNA |
| 688710 | 688786 | - | 77 | 153002879 | Anae109_R0003 | - | 06 Asp tRNA |
| 688803 | 688874 | - | 72 | 153002879 | Anae109_R0004 | - | 13 Val tRNA |
| 719011 | 719094 | - | 84 | 153002879 | Anae109_R0005 | - | 15 Leu tRNA |
| 865621 | 865693 | + | 73 | 153002879 | Anae109_R0006 | - | 16 Met tRNA |
| 1070068 | 1070143 | - | 76 | 153002879 | Anae109_R0007 | - | 02 Ala tRNA |
| 1232384 | 1232457 | - | 74 | 153002879 | Anae109_R0008 | - | 03 Pro tRNA |
| 1357057 | 1357128 | + | 72 | 153002879 | Anae109_R0009 | - | 19 Cys tRNA |
| 1429611 | 1429684 | + | 74 | 153002879 | Anae109_R0010 | - | 05 Gln tRNA |
| 1429752 | 1429826 | + | 75 | 153002879 | Anae109_R0011 | - | 04 Glu tRNA |
| 1607905 | 1607980 | + | 76 | 153002879 | Anae109_R0012 | - | 02 Ala tRNA |
| 1745420 | 1745496 | + | 77 | 153002879 | Anae109_R0013 | - | 16 Met tRNA |
| 2138288 | 2138359 | + | 72 | 153002879 | Anae109_R0014 | - | 13 Val tRNA |
| 2230996 | 2231090 | - | 95 | 153002879 | Anae109_R0015 | - | Sec tRNA |
| 2249904 | 2249977 | - | 74 | 153002879 | Anae109_R0016 | - | 16 Met tRNA |
| 2293797 | 2293868 | + | 72 | 153002879 | Anae109_R0017 | - | 13 Val tRNA |
| 2330892 | 2330967 | - | 76 | 153002879 | Anae109_R0018 | - | 12 Thr tRNA |
| 2529306 | 2529381 | - | 76 | 153002879 | Anae109_R0019 | - | 20 Trp tRNA |
| 2530828 | 2530903 | - | 76 | 153002879 | Anae109_R0020 | - | 12 Thr tRNA |
| 2530932 | 2531007 | - | 76 | 153002879 | Anae109_R0021 | - | 01 Gly tRNA |
| 2531050 | 2531132 | - | 83 | 153002879 | Anae109_R0022 | - | 18 Tyr tRNA |
| 2531189 | 2531264 | - | 76 | 153002879 | Anae109_R0023 | - | 12 Thr tRNA |
| 2561560 | 2561643 | + | 84 | 153002879 | Anae109_R0024 | - | 15 Leu tRNA |
| 2584372 | 2584453 | + | 82 | 153002879 | Anae109_R0025 | - | 15 Leu tRNA |
| 2725647 | 2725720 | - | 74 | 153002879 | Anae109_R0026 | - | 11 Arg tRNA |
| 2960257 | 2960332 | + | 76 | 153002879 | Anae109_R0027 | - | 07 Asn tRNA |
| 2977942 | 2978057 | - | 116 | 153002879 | Anae109_R0028 | - | 5S ribosomal RNA |
| 2978202 | 2981180 | - | 2979 | 153002879 | Anae109_R0029 | - | 23S ribosomal RNA |
| 2981377 | 2981452 | - | 76 | 153002879 | Anae109_R0030 | - | 02 Ala tRNA |
| 2981474 | 2981551 | - | 78 | 153002879 | Anae109_R0031 | - | 14 Ile tRNA |
| 2981747 | 2983296 | - | 1550 | 153002879 | Anae109_R0032 | - | 16S ribosomal RNA |
| 3063372 | 3063444 | + | 73 | 153002879 | Anae109_R0033 | - | 10 Lys tRNA |
| 3074417 | 3074489 | + | 73 | 153002879 | Anae109_R0034 | - | 04 Glu tRNA |
| 3181195 | 3181271 | + | 77 | 153002879 | Anae109_R0035 | - | 11 Arg tRNA |
| 3237668 | 3238017 | + | 350 | 153002879 | Anae109_R0036 | - | tmRNA |
| 3901308 | 3901381 | - | 74 | 153002879 | Anae109_R0037 | - | 03 Pro tRNA |
| 3923555 | 3923640 | + | 86 | 153002879 | Anae109_R0038 | - | 15 Leu tRNA |
| 3964902 | 3965017 | - | 116 | 153002879 | Anae109_R0039 | - | 5S ribosomal RNA |
| 3965161 | 3968139 | - | 2979 | 153002879 | Anae109_R0040 | - | 23S ribosomal RNA |
| 3968336 | 3968411 | - | 76 | 153002879 | Anae109_R0041 | - | 02 Ala tRNA |
| 3968433 | 3968510 | - | 78 | 153002879 | Anae109_R0042 | - | 14 Ile tRNA |
| 3968706 | 3970255 | - | 1550 | 153002879 | Anae109_R0043 | - | 16S ribosomal RNA |
| 4024732 | 4024813 | - | 82 | 153002879 | Anae109_R0044 | - | 15 Leu tRNA |
| 4025443 | 4025515 | - | 73 | 153002879 | Anae109_R0045 | - | 10 Lys tRNA |
| 4025631 | 4025707 | - | 77 | 153002879 | Anae109_R0046 | - | 11 Arg tRNA |
| 4025728 | 4025803 | - | 76 | 153002879 | Anae109_R0047 | - | 09 His tRNA |
| 4025846 | 4025922 | - | 77 | 153002879 | Anae109_R0048 | - | 11 Arg tRNA |
| 4025984 | 4026057 | - | 74 | 153002879 | Anae109_R0049 | - | 03 Pro tRNA |
| 4295655 | 4295729 | - | 75 | 153002879 | Anae109_R0050 | - | 01 Gly tRNA |
| 4353549 | 4353876 | - | 328 | 153002879 | Anae109_R0051 | - | RNA component of RNaseP |
| 4385642 | 4385752 | - | 111 | 153002879 | Anae109_R0052 | - | SRP RNA; RNA component of signal recognition particle |
| 4385814 | 4385903 | - | 90 | 153002879 | Anae109_R0053 | - | 08 Ser tRNA |
| 4385972 | 4386059 | - | 88 | 153002879 | Anae109_R0054 | - | 08 Ser tRNA |
| 4640041 | 4640130 | + | 90 | 153002879 | Anae109_R0055 | - | 08 Ser tRNA |
| 4640152 | 4640241 | + | 90 | 153002879 | Anae109_R0056 | - | 08 Ser tRNA |
| 4640300 | 4640376 | + | 77 | 153002879 | Anae109_R0057 | - | 11 Arg tRNA |
| 4945835 | 4945910 | + | 76 | 153002879 | Anae109_R0058 | - | 01 Gly tRNA |

