Геном прокариот/Материалы:NC 009749
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LOCUS NC_009749 1890909 bp DNA circular BCT 28-AUG-2007
DEFINITION Francisella tularensis subsp. holarctica FTNF002-00, complete genome.
ACCESSION NC_009749
VERSION NC_009749.1 GI:156501369
KEYWORDS .
SOURCE Francisella tularensis subsp. holarctica FTNF002-00
ORGANISM Francisella tularensis subsp. holarctica FTNF002-00
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Francisellaceae; Francisella.
REFERENCE 1 (bases 1 to 1890909)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 2 (bases 1 to 1890909)
AUTHORS Godbole,S., Zhou,L., Bruce,D., Crawford,R., Detter,C.,
Dempsey,M.P., Lion,C., Munk,C., Noronha,J., Scheuermann,R.H. and
Brettin,T.S.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2007) BioHealthBase, 6000 Harry Hines Blvd,
Dallas, TX 75390, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000803.
Souce DNA and bacteria available from Dr. Tom Brettin
(brettin@lanl.gov) or Dr. Michael P. Dempsey
(michael.dempsey@pentagon.af.mil); The sequencing of Francisella
tularensis subspecies holarctica genome was performed at the JGI
production genomics facility in Walnut Creek, CA. Genome finishing
was performed by the JGI at Los Alamos National Laboratory, Los
Alamos, NM. Annotation was performed at BioHealthBase, a
Bioinformatics Resource Center supported by the NIH/NIAID. The
sequencing was supported by Intelligence Technology Innovation
Center.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 22455 | 22872 | - | 418 | 156501369 | FTA_2139 | - | tmRNA |
| 75460 | 75609 | - | 150 | 156501369 | FTA_2133 | - | FtaRFN1 |
| 124406 | 125934 | + | 1529 | 156501369 | FTA_2130 | - | 16S ribosomal RNA |
| 126030 | 126106 | + | 77 | 156501369 | FTA_2118 | - | 14 Ile tRNA |
| 126121 | 126196 | + | 76 | 156501369 | FTA_2096 | - | 02 Ala tRNA |
| 126186 | 129137 | + | 2952 | 156501369 | FTA_2122 | - | 23S ribosomal RNA |
| 129182 | 129296 | + | 115 | 156501369 | FTA_2134 | - | 5S ribosomal RNA |
| 158224 | 158298 | + | 75 | 156501369 | FTA_2089 | - | 05 Gln tRNA |
| 222959 | 223034 | + | 76 | 156501369 | FTA_2088 | - | 04 Glu tRNA |
| 269331 | 269620 | + | 290 | 156501369 | FTA_2140 | - | RNA component of RNaseP |
| 292834 | 292908 | - | 75 | 156501369 | FTA_2104 | - | 01 Gly tRNA |
| 292923 | 292999 | - | 77 | 156501369 | FTA_2099 | - | 11 Arg tRNA |
| 327480 | 327569 | + | 90 | 156501369 | FTA_2092 | - | 08 Ser tRNA |
| 415982 | 416073 | + | 92 | 156501369 | FTA_2093 | - | 08 Ser tRNA |
| 416101 | 416176 | + | 76 | 156501369 | FTA_2112 | - | 13 Val tRNA |
| 417393 | 418921 | + | 1529 | 156501369 | FTA_2131 | - | 16S ribosomal RNA |
| 419017 | 419093 | + | 77 | 156501369 | FTA_2119 | - | 14 Ile tRNA |
| 419108 | 419183 | + | 76 | 156501369 | FTA_2097 | - | 02 Ala tRNA |
| 419173 | 422124 | + | 2952 | 156501369 | FTA_2123 | - | 23S ribosomal RNA |
| 422169 | 422283 | + | 115 | 156501369 | FTA_2135 | - | 5S ribosomal RNA |
| 451867 | 451981 | + | 115 | 156501369 | FTA_2137 | - | 5S ribosomal RNA |
| 528800 | 528876 | - | 77 | 156501369 | FTA_2108 | - | 16 Met tRNA |
| 608888 | 608974 | + | 87 | 156501369 | FTA_2084 | - | 15 Leu tRNA |
| 638397 | 638472 | - | 76 | 156501369 | FTA_2091 | - | 07 Asn tRNA |
| 645724 | 645798 | + | 75 | 156501369 | FTA_2105 | - | 01 Gly tRNA |
| 645814 | 645887 | + | 74 | 156501369 | FTA_2102 | - | 19 Cys tRNA |
| 645893 | 645981 | + | 89 | 156501369 | FTA_2085 | - | 15 Leu tRNA |
| 1119712 | 1121240 | + | 1529 | 156501369 | FTA_2132 | - | 16S ribosomal RNA |
| 1121336 | 1121412 | + | 77 | 156501369 | FTA_2120 | - | 14 Ile tRNA |
| 1121427 | 1121502 | + | 76 | 156501369 | FTA_2098 | - | 02 Ala tRNA |
| 1121492 | 1124443 | + | 2952 | 156501369 | FTA_2125 | - | 23S ribosomal RNA |
| 1124488 | 1124602 | + | 115 | 156501369 | FTA_2136 | - | 5S ribosomal RNA |
| 1229484 | 1229560 | + | 77 | 156501369 | FTA_2113 | - | 13 Val tRNA |
| 1292757 | 1292844 | + | 88 | 156501369 | FTA_2094 | - | 08 Ser tRNA |
| 1347166 | 1347248 | - | 83 | 156501369 | FTA_2086 | - | 15 Leu tRNA |
| 1347255 | 1347330 | - | 76 | 156501369 | FTA_2090 | - | 09 His tRNA |
| 1347358 | 1347434 | - | 77 | 156501369 | FTA_2100 | - | 11 Arg tRNA |
| 1347443 | 1347519 | - | 77 | 156501369 | FTA_2117 | - | 03 Pro tRNA |
| 1347537 | 1347612 | - | 76 | 156501369 | FTA_2107 | - | 17 Phe tRNA |
| 1410085 | 1410160 | - | 76 | 156501369 | FTA_2083 | - | 10 Lys tRNA |
| 1458931 | 1459006 | - | 76 | 156501369 | FTA_2114 | - | 13 Val tRNA |
| 1638666 | 1638742 | + | 77 | 156501369 | FTA_2109 | - | 16 Met tRNA |
| 1643816 | 1643891 | + | 76 | 156501369 | FTA_2101 | - | 11 Arg tRNA |
| 1644233 | 1644332 | - | 100 | 156501369 | FTA_2138 | - | RNA component of signal recognition particle |
| 1680772 | 1680847 | - | 76 | 156501369 | FTA_2095 | - | 20 Trp tRNA |
| 1682096 | 1682171 | - | 76 | 156501369 | FTA_2115 | - | 12 Thr tRNA |
| 1682200 | 1682273 | - | 74 | 156501369 | FTA_2106 | - | 01 Gly tRNA |
| 1682275 | 1682359 | - | 85 | 156501369 | FTA_2111 | - | 18 Tyr tRNA |
| 1706127 | 1706212 | - | 86 | 156501369 | FTA_2087 | - | 15 Leu tRNA |
| 1742084 | 1742160 | - | 77 | 156501369 | FTA_2110 | - | 16 Met tRNA |
| 1888710 | 1888786 | - | 77 | 156501369 | FTA_2103 | - | 06 Asp tRNA |
| 1888791 | 1888866 | - | 76 | 156501369 | FTA_2116 | - | 12 Thr tRNA |

