Геном прокариот/Материалы:NC 009879
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LOCUS NC_009879 1159772 bp DNA linear BCT 02-OCT-2007
DEFINITION Rickettsia canadensis str. McKiel, complete genome.
ACCESSION NC_009879
VERSION NC_009879.1 GI:157803189
KEYWORDS .
SOURCE Rickettsia canadensis str. McKiel
ORGANISM Rickettsia canadensis str. McKiel
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
REFERENCE 1 (bases 1 to 1159772)
AUTHORS Madan,A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Dasch,G. and Eremeeva,M.
TITLE Complete Genome Sequence of Rickettsia canadensis
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1159772)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1159772)
AUTHORS Madan,A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Dasch,G. and Eremeeva,M.
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2007) Neurogenomics Research Lab, University of
Iowa, 200 B EMRB, Iowa City, IA 52242, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000409.
Annotation was added by the NCBI Prokaryotic Genomes Automatic
Annotation Pipeline Group. Information about the Pipeline can be
found here:
http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
aware that the annotation is done automatically with little or no
manual curation.
COMPLETENESS: full length.
Расположение РНК
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 8620 | 8695 | - | 76 | 157803189 | A1E_t05682 | - | 17 Phe tRNA |
| 19274 | 19348 | + | 75 | 157803189 | A1E_t05684 | - | 04 Glu tRNA |
| 87085 | 87159 | + | 75 | 157803189 | A1E_t05686 | - | 12 Thr tRNA |
| 109832 | 109908 | + | 77 | 157803189 | A1E_t05688 | - | 16 Met tRNA |
| 155537 | 155612 | + | 76 | 157803189 | A1E_t05690 | - | 20 Trp tRNA |
| 185675 | 185750 | - | 76 | 157803189 | A1E_t05692 | - | 12 Thr tRNA |
| 259101 | 259192 | - | 92 | 157803189 | A1E_t05694 | - | 08 Ser tRNA |
| 272249 | 272367 | + | 119 | 157803189 | A1E_r05748 | - | 5S ribosomal RNA |
| 307168 | 307244 | + | 77 | 157803189 | A1E_t05696 | - | 16 Met tRNA |
| 353735 | 353809 | + | 75 | 157803189 | A1E_t05698 | - | 07 Asn tRNA |
| 385940 | 387447 | + | 1508 | 157803189 | A1E_r05750 | - | 16S ribosomal RNA |
| 428567 | 428641 | - | 75 | 157803189 | A1E_t05700 | - | 01 Gly tRNA |
| 433200 | 433286 | - | 87 | 157803189 | A1E_t05702 | - | 15 Leu tRNA |
| 445181 | 445255 | + | 75 | 157803189 | A1E_t05704 | - | 02 Ala tRNA |
| 475101 | 475177 | - | 77 | 157803189 | A1E_t05706 | - | 11 Arg tRNA |
| 516449 | 516523 | + | 75 | 157803189 | A1E_t05708 | - | 05 Gln tRNA |
| 516641 | 516717 | - | 77 | 157803189 | A1E_t05710 | - | 11 Arg tRNA |
| 530508 | 530597 | + | 90 | 157803189 | A1E_t05712 | - | 08 Ser tRNA |
| 547405 | 547492 | + | 88 | 157803189 | A1E_t05714 | - | 08 Ser tRNA |
| 552374 | 552449 | - | 76 | 157803189 | A1E_t05716 | - | 02 Ala tRNA |
| 556129 | 556205 | + | 77 | 157803189 | A1E_t05718 | - | 13 Val tRNA |
| 632465 | 632541 | + | 77 | 157803189 | A1E_t05720 | - | 06 Asp tRNA |
| 727737 | 727813 | - | 77 | 157803189 | A1E_t05722 | - | 14 Ile tRNA |
| 727837 | 727912 | - | 76 | 157803189 | A1E_t05724 | - | 10 Lys tRNA |
| 752829 | 752903 | - | 75 | 157803189 | A1E_t05726 | - | 19 Cys tRNA |
| 864861 | 864936 | - | 76 | 157803189 | A1E_t05728 | - | 13 Val tRNA |
| 880175 | 880248 | - | 74 | 157803189 | A1E_t05730 | - | 01 Gly tRNA |
| 880419 | 880504 | - | 86 | 157803189 | A1E_t05732 | - | 18 Tyr tRNA |
| 891284 | 891369 | + | 86 | 157803189 | A1E_t05734 | - | 15 Leu tRNA |
| 931317 | 931393 | + | 77 | 157803189 | A1E_t05736 | - | 09 His tRNA |
| 1002145 | 1002221 | - | 77 | 157803189 | A1E_t05738 | - | 16 Met tRNA |
| 1069029 | 1069105 | + | 77 | 157803189 | A1E_t05740 | - | 03 Pro tRNA |
| 1103896 | 1103972 | - | 77 | 157803189 | A1E_t05742 | - | 11 Arg tRNA |
| 1145637 | 1145723 | - | 87 | 157803189 | A1E_t05744 | - | 15 Leu tRNA |
| 1149518 | 1149592 | - | 75 | 157803189 | A1E_t05746 | - | 12 Thr tRNA |

